Maleno, M.J., Climent, N., Alcami, J., Casanova, V., Coiras, M., Merkel, A., de Villasante, I., Diez-Fuertes, F., Ayala-Suárez, R., Rodriguez-Agustin, A. (2025). Intracellular HIV-1 Tat regulator induces epigenetic changes in the DNA methylation landscape. Frontiers in Immunology. https://doi.org/10.3389/fimmu.2025.1532692

Cruzado, J. M., Sola, A., Pato, M. L., Manonelles, A., Varela, C., Setién, F. E., Quero, C., Heald, J. S., Piñeyro, D., Amaya-Garrido, A., Doladé, N., Codina, S., Couceiro, C., Bolaños, N., Gomà, M., Vigués, F., Merkel, A., & Berdasco, M. (2024). Severe ischemia and reperfusion injury induces epigenetic inactivation of LHX1 in kidney progenitor cells after kidney transplantation. American Journal of Transplantation. https://doi.org/10.1016/j.ajt.2024.11.003

Arribas, V., Onetti, Y., Ramiro-Pareta, M., Villacampa, P., Beck, H., Alberola, M., Esteve-Codina, A., Merkel, A., Sperandio, M., Martínez-Estrada, O. M., Schmid, B., & Montanez, E. (2024). Endothelial TDP-43 controls sprouting angiogenesis and vascular barrier integrity, and its deletion triggers neuroinflammation. JCI Insight, 9(5). https://doi.org/10.1172/jci.insight.177819

García-Vílchez, R., Añazco-Guenkova, A. M., Dietmann, S., López, J., Morón-Calvente, V., D’Ambrosi, S., Nombela, P., Zamacola, K., Mendizabal, I., García-Longarte, S., Zabala-Letona, A., Astobiza, I., Fernández, S., Paniagua, A., Miguel-López, B., Marchand, V., Alonso-López, D., Merkel, A., García-Tuñón, I., … Blanco, S. (2023). METTL1 promotes tumorigenesis through tRNA-derived fragment biogenesis in prostate cancer. Molecular Cancer, 22(1), 119. https://doi.org/10.1186/s12943-023-01809-8

Molina, O., Ortega-Sabater, C., Thampi, N., Fernández-Fuentes, N., Guerrero-Murillo, M., Martínez-Moreno, A., Vinyoles, M., Velasco-Hernández, T., Bueno, C., Trincado, J. L., Granada, I., Campos, D., Giménez, C., Boer, J. M., den Boer, M. L., Calvo, G. F., Camós, M., Fuster, J.-L., Velasco, P., … Menéndez, P. (2023). Chromosomal instability in aneuploid acute lymphoblastic leukemia associates with disease progression. EMBO Molecular Medicine, 16(1), 64–92. https://doi.org/10.1038/s44321-023-00006-w

Molina, O., Thampi, namitha, Trincado, J., Ortega-Sabater, C., Fernández-Calvo, G., Romecín, P., Martínez-Moreno, A., Velasco-Hernandez, T., Vinyoles, M., Pérez-García, V., Merkel, A., Granada, I., Camós, M., Fuster, J., Ballerini, P., Locatelli, F., Mullighan, C., Bueno, C., & Menendez, P. (2022). 3138 – HIGH CHROMOSOME INSTABILITY ACROSS ANEUPLOID SUBTYPES OF CHILDHOOD B-CELL ALL AND POTENTIAL ASSOCIATION WITH DISEASE PROGRESSION IN PDX MODELS. Experimental Hematology, 111, S113–S114. https://doi.org/10.1016/j.exphem.2022.07.194

Petazzi, P., Jorge-Torres, O. C., Gomez, A., Scognamiglio, I., Serra-Musach, J., Merkel, A., Grases, D., Xiol, C., O’Callaghan, M., Armstrong, J., Esteller, M., & Guil, S. (2023). Global Impairment of Immediate-Early Genes Expression in Rett Syndrome Models and Patients Linked to Myelination Defects. International Journal of Molecular Sciences, 24(2). https://doi.org/10.3390/ijms24021453

Cristalli, C., Manara, M. C., Valente, S., Pellegrini, E., Bavelloni, A., De Feo, A., Blalock, W., Di Bello, E., Piñeyro, D., Merkel, A., Esteller, M., Tirado, O. M., Mai, A., & Scotlandi, K. (2022). Novel Targeting of DNA Methyltransferase Activity Inhibits Ewing Sarcoma Cell Proliferation and Enhances Tumor Cell Sensitivity to DNA Damaging Drugs by Activating the DNA Damage Response. Frontiers in Endocrinology, 13. https://doi.org/10.3389/fendo.2022.876602

Blecua, P., Davalos, V., de Villasante, I., Merkel, A., Musulen, E., Coll-SanMartin, L., & Esteller, M. (2022). Refinement of computational identification of somatic copy number alterations using DNA methylation microarrays illustrated in cancers of unknown primary. Briefings in Bioinformatics. https://doi.org/10.1093/bib/bbac161

Merkel, A., & Esteller, M. (2022). Experimental and Bioinformatic Approaches to Studying DNA Methylation in Cancer. Cancers, 14(2). https://doi.org/10.3390/CANCERS14020349